Microarray Data Explorer
Info Raw gene Expression data is sourced from GEO, and the appropriate db package for mapping probes to gene symbols was sourced from the Bioconductor AnnotationData packages. You can read more about microarray data here.
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GROUP CONDITION SAMPLES
Islets
GSM1077110 GSM1077119 GSM1077113 GSM1077114
GSM1077111 GSM1077112 GSM1077115 GSM1077116 GSM1077117 GSM1077118
Description

Submission Date: Feb 04, 2013

Summary: Expression profiling of cell cycle genes in human pancreatic islets with and without type 2 diabetes

GEO Accession ID: GSE44035

PMID: 23935095

Description

Submission Date: Feb 04, 2013

Summary: Expression profiling of cell cycle genes in human pancreatic islets with and without type 2 diabetes

GEO Accession ID: GSE44035

PMID: 23935095

Visualize Samples

Info Visualizations are precomputed using the Python package scanpy on the top 5000 most variable genes.

Precomputed Differential Gene Expression

Info Differential expression signatures are automatically computed using the limma R package. More options for differential expression are available to compute below.

Signatures:

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Control Condition

Perturbation Condition

Only conditions with at least 1 replicate are available to select

Differential Gene Expression Analysis
Info Differential expression signatures can be computed using DESeq2 or characteristic direction.
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