Raw gene Expression data is sourced from GEO, and the appropriate db package for mapping probes to gene symbols was sourced from the Bioconductor AnnotationData packages.
You can read more about microarray data here.
Select conditions below to toggle them from the plot:
| GROUP | CONDITION | SAMPLES |
|---|---|---|
| GPR120 Knockout mice |
GSM795602 GSM795604 GSM795606
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|
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GSM795619 GSM795621 GSM795623
|
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| Wildtype mice |
GSM795608 GSM795610 GSM795612
|
|
|
GSM795615 GSM795617 GSM795625
|
Submission Date: Sep 13, 2011
Summary: Analysis of GPR120 which play roles for the fatty acid sensor in adipose tissue. Results provide insight into the transcriptional effects caused by the loss of the GPR120 proteins and provide further insight into their functions.
GEO Accession ID: GSE32095
PMID: 22343897
Submission Date: Sep 13, 2011
Summary: Analysis of GPR120 which play roles for the fatty acid sensor in adipose tissue. Results provide insight into the transcriptional effects caused by the loss of the GPR120 proteins and provide further insight into their functions.
GEO Accession ID: GSE32095
PMID: 22343897
Visualizations are precomputed using the Python package scanpy on the top 5000 most variable genes.
Differential expression signatures are automatically computed using the limma R package.
More options for differential expression are available to compute below.
Signatures:
Control Condition
Perturbation Condition
Only conditions with at least 1 replicate are available to select
Differential expression signatures can be computed using DESeq2 or characteristic direction.