Select conditions below to toggle them from the plot:
GROUP | CONDITION | SAMPLES |
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Human islets from cadaveric organ donors |
GSM7086403 GSM7086404 GSM7086405 GSM7086406 GSM7086407
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GSM7086393 GSM7086394 GSM7086395 GSM7086396 GSM7086397
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GSM7086398 GSM7086399 GSM7086400 GSM7086401 GSM7086402
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GSM7086408 GSM7086409 GSM7086410 GSM7086411 GSM7086412
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Submission Date: Mar 07, 2023
Summary: Inhibition of polyamine biosynthesis using α-difluoromethylornithine (DFMO), an inhibitor of ornithine decarboxylase (ODC), reduces β-cell stress and type 1 diabetes (T1D) incidence in preclinical models. However, underlying cellular and molecular mechanisms and the tolerability and effectiveness of polyamine depletion by DFMO in humans with T1D remain unknown. Transcriptomics and proteomics of cytokine-stressed human islets treated with DFMO reveal alterations in mRNA translation, nascent protein transport, and secretion. Collectively, our data suggest that inhibition of polyamine biosynthesis may preserve β-cell function in T1D via islet cell-autonomous responses to stress.
GEO Accession ID: GSE226888
PMID: No Pubmed ID
Submission Date: Mar 07, 2023
Summary: Inhibition of polyamine biosynthesis using α-difluoromethylornithine (DFMO), an inhibitor of ornithine decarboxylase (ODC), reduces β-cell stress and type 1 diabetes (T1D) incidence in preclinical models. However, underlying cellular and molecular mechanisms and the tolerability and effectiveness of polyamine depletion by DFMO in humans with T1D remain unknown. Transcriptomics and proteomics of cytokine-stressed human islets treated with DFMO reveal alterations in mRNA translation, nascent protein transport, and secretion. Collectively, our data suggest that inhibition of polyamine biosynthesis may preserve β-cell function in T1D via islet cell-autonomous responses to stress.
GEO Accession ID: GSE226888
PMID: No Pubmed ID
Signatures:
Control Condition
Perturbation Condition
Only conditions with at least 1 replicate are available to select
This pipeline enables you to analyze and visualize your bulk RNA sequencing datasets with an array of downstream analysis and visualization tools. The pipeline includes: PCA analysis, Clustergrammer interactive heatmap, library size analysis, differential gene expression analysis, enrichment analysis, and L1000 small molecule search.